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Tuesday, January 6, 2015

ICM - Marina

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Playing with some calcium imaging data from Marina.  First thing first, motion correction with ecc! Looks like it works pretty well. I ...
Friday, December 12, 2014

Microsoft Research Talk

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Check out this video of my talk on my thesis work at Microsoft Research! Actually, this video doesn't have the slides. Check out the ...
Monday, November 3, 2014

Neural Turing Machines

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Graves, A., Wayne, G., Danihelka, I. (2014) Neural Turing Machines. ArXiv Paper from Deep Mind. "Computer programs make use of thre...
Monday, October 27, 2014

Working Memory Review

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Circuits - Seconds Classics on persistent activity Fuster, J.M., Alexander, G.E. (1971) Neuron Activity Related to Short-Term Memory. Sc...
Tuesday, October 21, 2014

ICA vs. ROI Signal Extraction

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Figure 1: Calculation of Signal-to-Noise Ratio (SNR). (A) Simultaneous optical and electrophysiological recordings of several cells under...
Wednesday, August 20, 2014

ICM walkthrough 1

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We will illustrate the use and utility of ICM through several example walkthroughs of imaging data analysis. The first data set is calcium ...
Tuesday, August 12, 2014

NS&B Lecture

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My lecture at NS&B covering PCA, ICA and their application in automatically extracting signals from imaging data.
Thursday, July 31, 2014

Warping Gifs

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Friday, July 18, 2014

Swim Oscillator Neuron Review

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Collecting papers on identified neurons from previous work. Briggman, K.L., Kristan Jr., W.B. (2006) Imaging Dedicated and Multifunctiona...